./Analysis/Analysis_intro.qmd
19
Generalizability evaluation
Gut microbiome analysis for CRC detection: from raw sequences to machine learning models
Introduction
16S rRNA Sequence Processing
1
Reference database
2
Quality control
3
Loading data in QIIME
4
Removing primers
5
ASVs
6
OTUs
7
Streamlining the analysis process
Metagenomics Sequence Processing
8
Quality control
9
Host DNA Removal
10
Sequence Assembly
11
Taxonomic Profiling
12
Functional Profiling
./Analysis/Analysis_intro.qmd
13
Data loading
14
Species filtering
15
Feature transformation
16
Principal Component Analysis
17
Statistical analysis
18
Building a CRC classifier
19
Generalizability evaluation
./Analysis/Analysis_intro.qmd
19
Generalizability evaluation
Generalizability evaluation
This is a Quarto book.
To learn more about Quarto books visit
https://quarto.org/docs/books
.
18
Building a CRC classifier